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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10267810 chr7:140172107 A/G LOC441455 chr9:99488103-99489749:+ 0.49 6.03 3.97E-9 Box Plot
BLCA rs1027203 chr6:26639332 G/C ZNF322B chr9:99957633-99961910:- 0.53 9.52 2.05E-19 Box Plot
BLCA rs1027204 chr6:26639613 T/C ZNF322B chr9:99957633-99961910:- 0.54 9.9 1.02E-20 Box Plot
BLCA rs10273061 chr7:140167279 T/A LOC441455 chr9:99488103-99489749:+ 0.49 6.03 3.77E-9 Box Plot
BLCA rs10275142 chr7:140142492 T/C LOC441455 chr9:99488103-99489749:+ 0.49 6 4.53E-9 Box Plot
BLCA rs10276629 chr7:40847648 G/A FAM175A chr4:84380670-84444501:- -0.33 -5.96 5.88E-9 Box Plot
BLCA rs10280692 chr7:33078661 T/C FKBP9L chr7:55748767-55780945:- 0.29 6.28 8.96E-10 Box Plot
BLCA rs1036839 chr18:67182449 A/G C18orf55 chr18:71815746-71826204:+ -0.74 -6.43 3.77E-10 Box Plot
BLCA rs1036839 chr18:67182449 A/G CNDP2 chr18:72163051-72190689:+ -0.72 -6.43 3.86E-10 Box Plot
BLCA rs1036839 chr18:67182449 A/G CTDP1 chr18:77439801-77516623:+ -0.8 -6.73 6.36E-11 Box Plot
BLCA rs1036839 chr18:67182449 A/G HDHD2 chr18:44633774-44676891:- -0.66 -6.07 3.13E-9 Box Plot
BLCA rs1036839 chr18:67182449 A/G KDSR chr18:60994959-61034743:- -0.77 -7.25 2.29E-12 Box Plot
BLCA rs1036839 chr18:67182449 A/G KIAA1468 chr18:59854491-59975062:+ -0.7 -8.38 1.02E-15 Box Plot
BLCA rs1036839 chr18:67182449 A/G MEX3C chr18:48700920-48744674:- -0.65 -6.37 5.58E-10 Box Plot
BLCA rs1036839 chr18:67182449 A/G NARS chr18:55267888-55289445:- -0.77 -7.57 2.82E-13 Box Plot